I am sorry to hear of your frustration and disapointment. I think you will find that there are many very satisfied BibleWorks users out there. I will not deny that there is a learning curve (like there is for any thing else - especially complex computer programs), but it is worth it.
I highly recommend watching the videos on the second CD and reading the manual. There is a section in the manual that gives English, Greek and Hebrew examples. There are simple and more complex morphological examples all in chart form. I cannot remember the page number, but it is towards the beginning.
Lets see about your specific questions:

Originally Posted by
dmiller
I am a new (and somewhat frustrated) Bibleworks user who does not have a great deal of time to figure out all the ins and outs of this program.
Perhaps someone could help me with a few specific changes that I would like to make in the way Bibleworks displays text:
1) I am trying to find a way to conduct a search in a morphological text and have the results automatically display in another version. For example, if I seach for all occurrences of the word 'logos' in BNM, it seems natural to display the results in the much more elegant BNT, but the running text in the left column is set to BNM.
For version 6.0:
a. Go to tools - options - option flags
b. Expand 'Results Window Configuration Options'
c. Place a check in the box for 'Do not automatically make morphology version display version'
- Just to check:
d. Expand "Shutdown Options'
e. Make sure there is a check in the box for 'Save setup options on exit'
f. Make sure there is NO check in the box for 'Initialize INI file on exit'
g. Click OK
Next set of steps:
a. Go to View - Choose display versions.
b. Make sure that only those versions you want displayed are checked
c. Click OK
d. Go to Seach - Choose search version
e. Choose BNM
Now you should have BNM as you search version (BNM will be in the large box to the left of the command line), and those display version you selected (I will assume BNT is one of them).
Next set of steps:
a. From the command line tyle .logos including the period.
b. Hit enter on your key board
You will see the results for all the froms of logos with the hits highlighted in yellow.

Originally Posted by
dmiller
2) I notice that there is a Synopsis tool that follows the Aland numbering system, but the text version is set to NAS rather than BNT. Is there a way to change the version in the Synopsis tool? I would think there should also be a way to display search results in a synopsis window that preserves parallel verses in the other Gospels. This would be particularly useful in cases where I want to compare Luke's use of a particular word with the word usage in Matthew and Mark. Unfortunately, when I try to display search results in the synopsis tool all 3 columns display the same verse.
a. Go to Tools - Synopsis Window
b. File open - aland.sdf
c. File edit
- The the second line add BNT after /Display NAU
d. File run
You should now see each entry in both the NAU and BNT, you will have the number of parallel windows as there are synoptic comaparisions.
For example for Prologue you will have four windows, for The Promise of the Birth of John the Baptist you will have only one.

Originally Posted by
dmiller
3) Finally, is there a handy introduction to running complex original language searches? My main reason for purchasing Bibleworks was to take advantage of its original language search capabilities, but the Bibleworks User Manual restricts itself for the most part to English examples. The coding system seems unnecessarily complicated!
Finally see the section of the manual I refered to above. Also there are other thread on this forum that give example Advanced Search Engine queries. You will also find several of those in your ase directory under BibleWorks 6.
Enjoy,